Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Gm45444-201ENSMUST00000211394 898 ntBASIC19.31■□□□□ 0.68
Gm3543D3Z235 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3543D3Z235 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3543D3Z235 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3543D3Z235 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm3543D3Z235 Gm43566-201ENSMUST00000196851 808 ntBASIC19.3■□□□□ 0.68
Gm3543D3Z235 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3543D3Z235 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm3543D3Z235 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm3543D3Z235 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm3543D3Z235 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm3543D3Z235 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3543D3Z235 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm3543D3Z235 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm3543D3Z235 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3543D3Z235 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm3543D3Z235 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3543D3Z235 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm3543D3Z235 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Gm3543D3Z235 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.26■□□□□ 0.67
Gm3543D3Z235 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3543D3Z235 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3543D3Z235 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm3543D3Z235 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm3543D3Z235 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm3543D3Z235 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3543D3Z235 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm3543D3Z235 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3543D3Z235 Gm15546-201ENSMUST00000122095 826 ntBASIC19.24■□□□□ 0.67
Gm3543D3Z235 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.24■□□□□ 0.67
Gm3543D3Z235 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3543D3Z235 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.23■□□□□ 0.67
Gm3543D3Z235 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm3543D3Z235 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3543D3Z235 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3543D3Z235 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3543D3Z235 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.22■□□□□ 0.67
Gm3543D3Z235 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3543D3Z235 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3543D3Z235 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3543D3Z235 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm3543D3Z235 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.21■□□□□ 0.67
Gm3543D3Z235 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm3543D3Z235 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.21■□□□□ 0.67
Gm3543D3Z235 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Gm13238-201ENSMUST00000117655 780 ntBASIC19.2■□□□□ 0.66
Gm3543D3Z235 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3543D3Z235 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3543D3Z235 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3543D3Z235 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3543D3Z235 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms