Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.44■□□□□ 0.7
Smim17A0A504 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim17A0A504 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim17A0A504 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim17A0A504 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.43■□□□□ 0.7
Smim17A0A504 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim17A0A504 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim17A0A504 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim17A0A504 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.43■□□□□ 0.7
Smim17A0A504 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim17A0A504 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim17A0A504 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smim17A0A504 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Smim17A0A504 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim17A0A504 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim17A0A504 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim17A0A504 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim17A0A504 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smim17A0A504 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.41■□□□□ 0.7
Smim17A0A504 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smim17A0A504 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smim17A0A504 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smim17A0A504 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim17A0A504 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.4■□□□□ 0.7
Smim17A0A504 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Smim17A0A504 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.4■□□□□ 0.7
Smim17A0A504 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smim17A0A504 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim17A0A504 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim17A0A504 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.39■□□□□ 0.69
Smim17A0A504 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Smim17A0A504 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim17A0A504 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim17A0A504 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.38■□□□□ 0.69
Smim17A0A504 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smim17A0A504 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim17A0A504 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Smim17A0A504 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim17A0A504 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim17A0A504 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim17A0A504 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim17A0A504 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim17A0A504 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smim17A0A504 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim17A0A504 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Smim17A0A504 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smim17A0A504 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim17A0A504 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim17A0A504 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.36■□□□□ 0.69
Smim17A0A504 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smim17A0A504 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smim17A0A504 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smim17A0A504 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smim17A0A504 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smim17A0A504 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smim17A0A504 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim17A0A504 Gm22567-201ENSMUST00000175542 342 ntBASIC19.34■□□□□ 0.69
Smim17A0A504 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.34■□□□□ 0.69
Smim17A0A504 Zfp131-205ENSMUST00000223812 663 ntBASIC19.34■□□□□ 0.69
Smim17A0A504 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim17A0A504 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smim17A0A504 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim17A0A504 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smim17A0A504 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smim17A0A504 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.33■□□□□ 0.69
Smim17A0A504 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smim17A0A504 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Smim17A0A504 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim17A0A504 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim17A0A504 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smim17A0A504 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim17A0A504 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim17A0A504 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smim17A0A504 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim17A0A504 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.32■□□□□ 0.68
Smim17A0A504 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.31■□□□□ 0.68
Smim17A0A504 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim17A0A504 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smim17A0A504 Golph3-202ENSMUST00000226517 2359 ntBASIC19.3■□□□□ 0.68
Smim17A0A504 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms