Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-2A0A140T8N6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-2A0A140T8N6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv13-2A0A140T8N6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-2A0A140T8N6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-2A0A140T8N6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-2A0A140T8N6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-2A0A140T8N6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-2A0A140T8N6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trbv13-2A0A140T8N6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv13-2A0A140T8N6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms