Protein–RNA interactions for Protein: A0A140LIR9

Gm4881, Predicted gene 4881, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4881A0A140LIR9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm4881A0A140LIR9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm4881A0A140LIR9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm4881A0A140LIR9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm4881A0A140LIR9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm4881A0A140LIR9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm4881A0A140LIR9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm4881A0A140LIR9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Gm4881A0A140LIR9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm4881A0A140LIR9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm4881A0A140LIR9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gm4881A0A140LIR9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm4881A0A140LIR9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm4881A0A140LIR9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm4881A0A140LIR9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.64■□□□□ 0.57
Gm4881A0A140LIR9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm4881A0A140LIR9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm4881A0A140LIR9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm4881A0A140LIR9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.62■□□□□ 0.57
Gm4881A0A140LIR9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm4881A0A140LIR9 Gm10420-201ENSMUST00000121713 882 ntBASIC18.61■□□□□ 0.57
Gm4881A0A140LIR9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm4881A0A140LIR9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm4881A0A140LIR9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm4881A0A140LIR9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm4881A0A140LIR9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm4881A0A140LIR9 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.58■□□□□ 0.56
Gm4881A0A140LIR9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm4881A0A140LIR9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm4881A0A140LIR9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms