Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-3A0A0B4J1K1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-3A0A0B4J1K1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Trav4-3A0A0B4J1K1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-3A0A0B4J1K1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.63□□□□□ -0.07
Trav4-3A0A0B4J1K1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-3A0A0B4J1K1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-3A0A0B4J1K1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Zfp131-205ENSMUST00000223812 663 ntBASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav4-3A0A0B4J1K1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-3A0A0B4J1K1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.58□□□□□ -0.07
Trav4-3A0A0B4J1K1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-3A0A0B4J1K1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav4-3A0A0B4J1K1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav4-3A0A0B4J1K1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4-3A0A0B4J1K1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4-3A0A0B4J1K1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4-3A0A0B4J1K1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-3A0A0B4J1K1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms