Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv5A0A0B4J1G9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv5A0A0B4J1G9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv5A0A0B4J1G9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trbv5A0A0B4J1G9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Trbv5A0A0B4J1G9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv5A0A0B4J1G9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trbv5A0A0B4J1G9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv5A0A0B4J1G9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv5A0A0B4J1G9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.17■□□□□ 0.34
Trbv5A0A0B4J1G9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv5A0A0B4J1G9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv5A0A0B4J1G9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv5A0A0B4J1G9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv5A0A0B4J1G9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv5A0A0B4J1G9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trbv5A0A0B4J1G9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms