Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh7A0A0A6YY83 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh7A0A0A6YY83 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh7A0A0A6YY83 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdh7A0A0A6YY83 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh7A0A0A6YY83 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh7A0A0A6YY83 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh7A0A0A6YY83 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh7A0A0A6YY83 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh7A0A0A6YY83 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.14■■□□□ 1.14
Pcdh7A0A0A6YY83 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh7A0A0A6YY83 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh7A0A0A6YY83 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh7A0A0A6YY83 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh7A0A0A6YY83 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh7A0A0A6YY83 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdh7A0A0A6YY83 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.12■■□□□ 1.13
Pcdh7A0A0A6YY83 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh7A0A0A6YY83 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh7A0A0A6YY83 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm45444-201ENSMUST00000211394 898 ntBASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm5921-201ENSMUST00000075898 882 ntBASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdh7A0A0A6YY83 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdh7A0A0A6YY83 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms