Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4d-3A0A075B625 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4d-3A0A075B625 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav4d-3A0A075B625 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4d-3A0A075B625 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4d-3A0A075B625 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.58□□□□□ -0.07
Trav4d-3A0A075B625 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4d-3A0A075B625 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav4d-3A0A075B625 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4d-3A0A075B625 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav4d-3A0A075B625 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav4d-3A0A075B625 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Iqck-206ENSMUST00000208658 2891 ntBASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav4d-3A0A075B625 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav4d-3A0A075B625 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4d-3A0A075B625 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4d-3A0A075B625 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4d-3A0A075B625 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav4d-3A0A075B625 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4d-3A0A075B625 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4d-3A0A075B625 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4d-3A0A075B625 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4d-3A0A075B625 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4d-3A0A075B625 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav4d-3A0A075B625 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4d-3A0A075B625 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4d-3A0A075B625 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms