Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6n-5A0A075B621 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-5A0A075B621 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav6n-5A0A075B621 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-5A0A075B621 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-5A0A075B621 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-5A0A075B621 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-5A0A075B621 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav6n-5A0A075B621 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-5A0A075B621 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-5A0A075B621 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav6n-5A0A075B621 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-5A0A075B621 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6n-5A0A075B621 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-5A0A075B621 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav6n-5A0A075B621 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-5A0A075B621 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav6n-5A0A075B621 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav6n-5A0A075B621 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-5A0A075B621 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-5A0A075B621 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6n-5A0A075B621 Gm45855-201ENSMUST00000212546 880 ntBASIC16.52■□□□□ 0.24
Trav6n-5A0A075B621 Nkain2-201ENSMUST00000092602 558 ntBASIC16.52■□□□□ 0.24
Trav6n-5A0A075B621 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-5A0A075B621 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav6n-5A0A075B621 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-5A0A075B621 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6n-5A0A075B621 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav6n-5A0A075B621 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6n-5A0A075B621 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms