Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7n-4A0A075B620 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7n-4A0A075B620 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav7n-4A0A075B620 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav7n-4A0A075B620 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Trav7n-4A0A075B620 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7n-4A0A075B620 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7n-4A0A075B620 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7n-4A0A075B620 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7n-4A0A075B620 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7n-4A0A075B620 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7n-4A0A075B620 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7n-4A0A075B620 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7n-4A0A075B620 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7n-4A0A075B620 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav7n-4A0A075B620 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7n-4A0A075B620 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav7n-4A0A075B620 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7n-4A0A075B620 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7n-4A0A075B620 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7n-4A0A075B620 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7n-4A0A075B620 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7n-4A0A075B620 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7n-4A0A075B620 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms