Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-1A0A075B5Z8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-1A0A075B5Z8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-1A0A075B5Z8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav6-1A0A075B5Z8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-1A0A075B5Z8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-1A0A075B5Z8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-1A0A075B5Z8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Gm7432-201ENSMUST00000210343 879 ntBASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-1A0A075B5Z8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.22■□□□□ 0.35
Trav6-1A0A075B5Z8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-1A0A075B5Z8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6-1A0A075B5Z8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 Gm11599-201ENSMUST00000118720 878 ntBASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-1A0A075B5Z8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-1A0A075B5Z8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-1A0A075B5Z8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Gm44428-201ENSMUST00000204474 874 ntBASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-1A0A075B5Z8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-1A0A075B5Z8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-1A0A075B5Z8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav6-1A0A075B5Z8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-1A0A075B5Z8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms