Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdh17Q9R100 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.12■□□□□ 0.97
Cdh17Q9R100 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh17Q9R100 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh17Q9R100 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh17Q9R100 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh17Q9R100 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cdh17Q9R100 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh17Q9R100 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.1■□□□□ 0.97
Cdh17Q9R100 Gm16437-201ENSMUST00000025669 507 ntBASIC21.1■□□□□ 0.97
Cdh17Q9R100 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh17Q9R100 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh17Q9R100 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdh17Q9R100 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.09■□□□□ 0.97
Cdh17Q9R100 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh17Q9R100 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.08■□□□□ 0.97
Cdh17Q9R100 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh17Q9R100 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Cdh17Q9R100 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh17Q9R100 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh17Q9R100 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh17Q9R100 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh17Q9R100 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh17Q9R100 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh17Q9R100 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh17Q9R100 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.07■□□□□ 0.96
Cdh17Q9R100 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh17Q9R100 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.06■□□□□ 0.96
Cdh17Q9R100 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh17Q9R100 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.06■□□□□ 0.96
Cdh17Q9R100 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh17Q9R100 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cdh17Q9R100 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh17Q9R100 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.04■□□□□ 0.96
Cdh17Q9R100 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Cdh17Q9R100 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdh17Q9R100 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh17Q9R100 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdh17Q9R100 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh17Q9R100 Gm11687-201ENSMUST00000118911 886 ntBASIC21.03■□□□□ 0.96
Cdh17Q9R100 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh17Q9R100 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh17Q9R100 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh17Q9R100 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh17Q9R100 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh17Q9R100 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh17Q9R100 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh17Q9R100 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Cdh17Q9R100 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh17Q9R100 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh17Q9R100 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.01■□□□□ 0.95
Cdh17Q9R100 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh17Q9R100 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cdh17Q9R100 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh17Q9R100 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh17Q9R100 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh17Q9R100 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh17Q9R100 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdh17Q9R100 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh17Q9R100 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh17Q9R100 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cdh17Q9R100 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdh17Q9R100 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.97■□□□□ 0.95
Cdh17Q9R100 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdh17Q9R100 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms