Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lime1Q9EQR5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lime1Q9EQR5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lime1Q9EQR5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lime1Q9EQR5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lime1Q9EQR5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lime1Q9EQR5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lime1Q9EQR5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Gm44428-201ENSMUST00000204474 874 ntBASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lime1Q9EQR5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lime1Q9EQR5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lime1Q9EQR5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lime1Q9EQR5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lime1Q9EQR5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lime1Q9EQR5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lime1Q9EQR5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lime1Q9EQR5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lime1Q9EQR5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lime1Q9EQR5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lime1Q9EQR5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lime1Q9EQR5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lime1Q9EQR5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lime1Q9EQR5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lime1Q9EQR5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lime1Q9EQR5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lime1Q9EQR5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.82■□□□□ 0.6
Lime1Q9EQR5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lime1Q9EQR5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.82■□□□□ 0.6
Lime1Q9EQR5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lime1Q9EQR5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lime1Q9EQR5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lime1Q9EQR5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Lime1Q9EQR5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lime1Q9EQR5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lime1Q9EQR5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.78■□□□□ 0.6
Lime1Q9EQR5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.78■□□□□ 0.6
Lime1Q9EQR5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lime1Q9EQR5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lime1Q9EQR5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lime1Q9EQR5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms