Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Ddx41Q91VN6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx41Q91VN6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ddx41Q91VN6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Ddx41Q91VN6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ddx41Q91VN6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx41Q91VN6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx41Q91VN6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx41Q91VN6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx41Q91VN6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ddx41Q91VN6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ddx41Q91VN6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx41Q91VN6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.68■■□□□ 1.54
Ddx41Q91VN6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx41Q91VN6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx41Q91VN6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.67■■□□□ 1.54
Ddx41Q91VN6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.67■■□□□ 1.54
Ddx41Q91VN6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Gm22567-201ENSMUST00000175542 342 ntBASIC24.66■■□□□ 1.54
Ddx41Q91VN6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx41Q91VN6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Gm15820-201ENSMUST00000201566 728 ntBASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx41Q91VN6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx41Q91VN6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.64■■□□□ 1.54
Ddx41Q91VN6 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.64■■□□□ 1.54
Ddx41Q91VN6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx41Q91VN6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx41Q91VN6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.63■■□□□ 1.53
Ddx41Q91VN6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx41Q91VN6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx41Q91VN6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx41Q91VN6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx41Q91VN6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ddx41Q91VN6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx41Q91VN6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx41Q91VN6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx41Q91VN6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx41Q91VN6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx41Q91VN6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx41Q91VN6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx41Q91VN6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx41Q91VN6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx41Q91VN6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx41Q91VN6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx41Q91VN6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Ddx41Q91VN6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx41Q91VN6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx41Q91VN6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ddx41Q91VN6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms