Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.34■■□□□ 1.17
Trim60Q8VI40 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim60Q8VI40 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim60Q8VI40 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim60Q8VI40 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim60Q8VI40 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim60Q8VI40 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.32■■□□□ 1.16
Trim60Q8VI40 Gm6311-201ENSMUST00000073790 878 ntBASIC22.32■■□□□ 1.16
Trim60Q8VI40 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim60Q8VI40 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim60Q8VI40 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim60Q8VI40 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim60Q8VI40 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Trim60Q8VI40 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim60Q8VI40 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim60Q8VI40 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim60Q8VI40 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.29■■□□□ 1.16
Trim60Q8VI40 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim60Q8VI40 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim60Q8VI40 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.29■■□□□ 1.16
Trim60Q8VI40 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.29■■□□□ 1.16
Trim60Q8VI40 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.29■■□□□ 1.16
Trim60Q8VI40 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim60Q8VI40 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim60Q8VI40 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Trim60Q8VI40 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Trim60Q8VI40 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim60Q8VI40 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
Trim60Q8VI40 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Trim60Q8VI40 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim60Q8VI40 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim60Q8VI40 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim60Q8VI40 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim60Q8VI40 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Trim60Q8VI40 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
Trim60Q8VI40 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim60Q8VI40 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trim60Q8VI40 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim60Q8VI40 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.23■■□□□ 1.15
Trim60Q8VI40 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim60Q8VI40 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim60Q8VI40 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim60Q8VI40 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trim60Q8VI40 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.22■■□□□ 1.15
Trim60Q8VI40 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim60Q8VI40 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Trim60Q8VI40 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim60Q8VI40 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trim60Q8VI40 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim60Q8VI40 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.2■■□□□ 1.15
Trim60Q8VI40 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim60Q8VI40 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.19■■□□□ 1.14
Trim60Q8VI40 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.19■■□□□ 1.14
Trim60Q8VI40 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms