Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q8VDP2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q8VDP2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q8VDP2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Q8VDP2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q8VDP2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q8VDP2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q8VDP2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q8VDP2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q8VDP2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q8VDP2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q8VDP2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Q8VDP2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q8VDP2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q8VDP2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q8VDP2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
Q8VDP2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q8VDP2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q8VDP2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Q8VDP2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q8VDP2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.92■□□□□ 0.94
Q8VDP2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q8VDP2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q8VDP2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Q8VDP2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.91■□□□□ 0.94
Q8VDP2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q8VDP2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.91■□□□□ 0.94
Q8VDP2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q8VDP2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.9■□□□□ 0.94
Q8VDP2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q8VDP2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.9■□□□□ 0.94
Q8VDP2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q8VDP2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Q8VDP2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q8VDP2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q8VDP2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q8VDP2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.89■□□□□ 0.94
Q8VDP2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q8VDP2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q8VDP2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q8VDP2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q8VDP2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.89■□□□□ 0.93
Q8VDP2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.89■□□□□ 0.93
Q8VDP2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q8VDP2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Q8VDP2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Q8VDP2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q8VDP2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q8VDP2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q8VDP2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q8VDP2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.87■□□□□ 0.93
Q8VDP2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q8VDP2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Q8VDP2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q8VDP2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q8VDP2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q8VDP2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.86■□□□□ 0.93
Q8VDP2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q8VDP2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Q8VDP2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q8VDP2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q8VDP2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q8VDP2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Q8VDP2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q8VDP2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q8VDP2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q8VDP2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Q8VDP2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Q8VDP2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Q8VDP2 Gm9397-201ENSMUST00000200125 605 ntBASIC20.83■□□□□ 0.93
Q8VDP2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q8VDP2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q8VDP2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q8VDP2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q8VDP2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Q8VDP2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms