Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Gm5812-201ENSMUST00000061073 957 ntBASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpp40Q8R1F9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpp40Q8R1F9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rpp40Q8R1F9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rpp40Q8R1F9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp40Q8R1F9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpp40Q8R1F9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Rpp40Q8R1F9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.26■■□□□ 1.31
Rpp40Q8R1F9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpp40Q8R1F9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpp40Q8R1F9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp40Q8R1F9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.22■■□□□ 1.31
Rpp40Q8R1F9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp40Q8R1F9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpp40Q8R1F9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpp40Q8R1F9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp40Q8R1F9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpp40Q8R1F9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Gm15546-201ENSMUST00000122095 826 ntBASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpp40Q8R1F9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rpp40Q8R1F9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpp40Q8R1F9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpp40Q8R1F9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms