Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Sox30Q8CGW4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox30Q8CGW4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox30Q8CGW4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox30Q8CGW4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox30Q8CGW4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.87■■□□□ 1.41
Sox30Q8CGW4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox30Q8CGW4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox30Q8CGW4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox30Q8CGW4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sox30Q8CGW4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sox30Q8CGW4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox30Q8CGW4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox30Q8CGW4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.84■■□□□ 1.41
Sox30Q8CGW4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox30Q8CGW4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox30Q8CGW4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
Sox30Q8CGW4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Sox30Q8CGW4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox30Q8CGW4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox30Q8CGW4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox30Q8CGW4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Sox30Q8CGW4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
Sox30Q8CGW4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.82■■□□□ 1.4
Sox30Q8CGW4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sox30Q8CGW4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
Sox30Q8CGW4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Sox30Q8CGW4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.81■■□□□ 1.4
Sox30Q8CGW4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox30Q8CGW4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox30Q8CGW4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox30Q8CGW4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox30Q8CGW4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Sox30Q8CGW4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox30Q8CGW4 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.76■■□□□ 1.39
Sox30Q8CGW4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox30Q8CGW4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.76■■□□□ 1.39
Sox30Q8CGW4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox30Q8CGW4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox30Q8CGW4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox30Q8CGW4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox30Q8CGW4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox30Q8CGW4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox30Q8CGW4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox30Q8CGW4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox30Q8CGW4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Sox30Q8CGW4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox30Q8CGW4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
Sox30Q8CGW4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox30Q8CGW4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox30Q8CGW4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Sox30Q8CGW4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox30Q8CGW4 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.71■■□□□ 1.39
Sox30Q8CGW4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sox30Q8CGW4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.7■■□□□ 1.38
Sox30Q8CGW4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.7■■□□□ 1.38
Sox30Q8CGW4 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.7■■□□□ 1.38
Sox30Q8CGW4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sox30Q8CGW4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sox30Q8CGW4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms