Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pabpn1Q8CCS6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pabpn1Q8CCS6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
Pabpn1Q8CCS6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
Pabpn1Q8CCS6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Pabpn1Q8CCS6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pabpn1Q8CCS6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pabpn1Q8CCS6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pabpn1Q8CCS6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pabpn1Q8CCS6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pabpn1Q8CCS6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Pabpn1Q8CCS6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Pabpn1Q8CCS6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
Pabpn1Q8CCS6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Pabpn1Q8CCS6 Gm43017-201ENSMUST00000198296 752 ntBASIC35.08■■■■□ 3.21
Pabpn1Q8CCS6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC35.08■■■■□ 3.21
Pabpn1Q8CCS6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Pabpn1Q8CCS6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Pabpn1Q8CCS6 Gm27405-201ENSMUST00000184201 112 ntBASIC35.07■■■■□ 3.2
Pabpn1Q8CCS6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Pabpn1Q8CCS6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Pabpn1Q8CCS6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Pabpn1Q8CCS6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Pabpn1Q8CCS6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Pabpn1Q8CCS6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
Pabpn1Q8CCS6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC35.05■■■■□ 3.2
Pabpn1Q8CCS6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC35.04■■■■□ 3.2
Pabpn1Q8CCS6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Pabpn1Q8CCS6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Pabpn1Q8CCS6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Pabpn1Q8CCS6 Gm7199-201ENSMUST00000118327 1485 ntBASIC35.03■■■■□ 3.2
Pabpn1Q8CCS6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Pabpn1Q8CCS6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Pabpn1Q8CCS6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC35.01■■■■□ 3.2
Pabpn1Q8CCS6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC35■■■■□ 3.19
Pabpn1Q8CCS6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Pabpn1Q8CCS6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Pabpn1Q8CCS6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC34.98■■■■□ 3.19
Pabpn1Q8CCS6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC34.98■■■■□ 3.19
Pabpn1Q8CCS6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC34.97■■■■□ 3.19
Pabpn1Q8CCS6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
Pabpn1Q8CCS6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC34.96■■■■□ 3.19
Pabpn1Q8CCS6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Pabpn1Q8CCS6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Pabpn1Q8CCS6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Pabpn1Q8CCS6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Pabpn1Q8CCS6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Pabpn1Q8CCS6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Pabpn1Q8CCS6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC34.93■■■■□ 3.18
Pabpn1Q8CCS6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
Pabpn1Q8CCS6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Pabpn1Q8CCS6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Pabpn1Q8CCS6 Gm11847-201ENSMUST00000125165 1119 ntBASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Mir7075-201ENSMUST00000184187 82 ntBASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Pabpn1Q8CCS6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pabpn1Q8CCS6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
Pabpn1Q8CCS6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pabpn1Q8CCS6 Gm37179-201ENSMUST00000194862 823 ntBASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Gm42569-201ENSMUST00000200539 472 ntBASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
Pabpn1Q8CCS6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Pabpn1Q8CCS6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
Pabpn1Q8CCS6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Pabpn1Q8CCS6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Pabpn1Q8CCS6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Pabpn1Q8CCS6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Pabpn1Q8CCS6 Gm43137-201ENSMUST00000198052 594 ntBASIC34.85■■■■□ 3.17
Pabpn1Q8CCS6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC34.85■■■■□ 3.17
Pabpn1Q8CCS6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Pabpn1Q8CCS6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC34.83■■■■□ 3.17
Pabpn1Q8CCS6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC34.82■■■■□ 3.16
Pabpn1Q8CCS6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Pabpn1Q8CCS6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC34.82■■■■□ 3.16
Pabpn1Q8CCS6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC34.82■■■■□ 3.16
Pabpn1Q8CCS6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Pabpn1Q8CCS6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
Pabpn1Q8CCS6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms