Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.73■□□□□ 0.91
SynpoQ8CC35 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SynpoQ8CC35 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SynpoQ8CC35 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynpoQ8CC35 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynpoQ8CC35 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SynpoQ8CC35 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SynpoQ8CC35 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SynpoQ8CC35 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SynpoQ8CC35 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.7■□□□□ 0.9
SynpoQ8CC35 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SynpoQ8CC35 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.68■□□□□ 0.9
SynpoQ8CC35 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Gm15546-201ENSMUST00000122095 826 ntBASIC20.68■□□□□ 0.9
SynpoQ8CC35 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynpoQ8CC35 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynpoQ8CC35 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.66■□□□□ 0.9
SynpoQ8CC35 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SynpoQ8CC35 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.65■□□□□ 0.9
SynpoQ8CC35 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynpoQ8CC35 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SynpoQ8CC35 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SynpoQ8CC35 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SynpoQ8CC35 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.64■□□□□ 0.89
SynpoQ8CC35 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynpoQ8CC35 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynpoQ8CC35 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.63■□□□□ 0.89
SynpoQ8CC35 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynpoQ8CC35 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SynpoQ8CC35 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynpoQ8CC35 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.62■□□□□ 0.89
SynpoQ8CC35 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.62■□□□□ 0.89
SynpoQ8CC35 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SynpoQ8CC35 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 158.6 ms