Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3rf2Q8BZT2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf2Q8BZT2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf2Q8BZT2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.03■■□□□ 1.12
Sh3rf2Q8BZT2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3rf2Q8BZT2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3rf2Q8BZT2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3rf2Q8BZT2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3rf2Q8BZT2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.99■■□□□ 1.11
Sh3rf2Q8BZT2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf2Q8BZT2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf2Q8BZT2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf2Q8BZT2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3rf2Q8BZT2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3rf2Q8BZT2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3rf2Q8BZT2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.98■■□□□ 1.11
Sh3rf2Q8BZT2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3rf2Q8BZT2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3rf2Q8BZT2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Sh3rf2Q8BZT2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf2Q8BZT2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf2Q8BZT2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.97■■□□□ 1.11
Sh3rf2Q8BZT2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3rf2Q8BZT2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3rf2Q8BZT2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.95■■□□□ 1.1
Sh3rf2Q8BZT2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf2Q8BZT2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3rf2Q8BZT2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3rf2Q8BZT2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3rf2Q8BZT2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sh3rf2Q8BZT2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sh3rf2Q8BZT2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Sh3rf2Q8BZT2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.9■■□□□ 1.1
Sh3rf2Q8BZT2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sh3rf2Q8BZT2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sh3rf2Q8BZT2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Sh3rf2Q8BZT2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sh3rf2Q8BZT2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3rf2Q8BZT2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Sh3rf2Q8BZT2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sh3rf2Q8BZT2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms