Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.62■■□□□ 1.05
Cpsf7Q8BTV2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cpsf7Q8BTV2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf7Q8BTV2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf7Q8BTV2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf7Q8BTV2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.61■■□□□ 1.05
Cpsf7Q8BTV2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cpsf7Q8BTV2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf7Q8BTV2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf7Q8BTV2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf7Q8BTV2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf7Q8BTV2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf7Q8BTV2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.59■■□□□ 1.05
Cpsf7Q8BTV2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf7Q8BTV2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf7Q8BTV2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf7Q8BTV2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cpsf7Q8BTV2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf7Q8BTV2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Cpsf7Q8BTV2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.58■■□□□ 1.04
Cpsf7Q8BTV2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cpsf7Q8BTV2 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.58■■□□□ 1.04
Cpsf7Q8BTV2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf7Q8BTV2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf7Q8BTV2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf7Q8BTV2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf7Q8BTV2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf7Q8BTV2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.55■■□□□ 1.04
Cpsf7Q8BTV2 Notumos-201ENSMUST00000151998 2659 ntBASIC21.54■■□□□ 1.04
Cpsf7Q8BTV2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.54■■□□□ 1.04
Cpsf7Q8BTV2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf7Q8BTV2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf7Q8BTV2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.54■■□□□ 1.04
Cpsf7Q8BTV2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Terc-201ENSMUST00000082862 423 ntBASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf7Q8BTV2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf7Q8BTV2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf7Q8BTV2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf7Q8BTV2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf7Q8BTV2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf7Q8BTV2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf7Q8BTV2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf7Q8BTV2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cpsf7Q8BTV2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf7Q8BTV2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.45■■□□□ 1.03
Cpsf7Q8BTV2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpsf7Q8BTV2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.44■■□□□ 1.02
Cpsf7Q8BTV2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms