Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh8Q7TSK3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.29■■□□□ 1
Pcdh8Q7TSK3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.29■■□□□ 1
Pcdh8Q7TSK3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh8Q7TSK3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh8Q7TSK3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh8Q7TSK3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh8Q7TSK3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.27■■□□□ 1
Pcdh8Q7TSK3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh8Q7TSK3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh8Q7TSK3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh8Q7TSK3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh8Q7TSK3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh8Q7TSK3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh8Q7TSK3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh8Q7TSK3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.23■□□□□ 0.99
Pcdh8Q7TSK3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh8Q7TSK3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh8Q7TSK3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh8Q7TSK3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh8Q7TSK3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh8Q7TSK3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh8Q7TSK3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh8Q7TSK3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh8Q7TSK3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh8Q7TSK3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh8Q7TSK3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh8Q7TSK3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Etf1-202ENSMUST00000180351 108 ntBASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh8Q7TSK3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh8Q7TSK3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh8Q7TSK3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms