Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Clhc1Q5M6W3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Clhc1Q5M6W3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clhc1Q5M6W3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clhc1Q5M6W3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clhc1Q5M6W3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clhc1Q5M6W3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clhc1Q5M6W3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clhc1Q5M6W3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clhc1Q5M6W3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clhc1Q5M6W3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Clhc1Q5M6W3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.69■□□□□ 0.9
Clhc1Q5M6W3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clhc1Q5M6W3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Clhc1Q5M6W3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.69■□□□□ 0.9
Clhc1Q5M6W3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clhc1Q5M6W3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clhc1Q5M6W3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clhc1Q5M6W3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clhc1Q5M6W3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.67■□□□□ 0.9
Clhc1Q5M6W3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.67■□□□□ 0.9
Clhc1Q5M6W3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Clhc1Q5M6W3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clhc1Q5M6W3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clhc1Q5M6W3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.66■□□□□ 0.9
Clhc1Q5M6W3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clhc1Q5M6W3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clhc1Q5M6W3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clhc1Q5M6W3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clhc1Q5M6W3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clhc1Q5M6W3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clhc1Q5M6W3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clhc1Q5M6W3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clhc1Q5M6W3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.64■□□□□ 0.89
Clhc1Q5M6W3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clhc1Q5M6W3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clhc1Q5M6W3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clhc1Q5M6W3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clhc1Q5M6W3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clhc1Q5M6W3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clhc1Q5M6W3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clhc1Q5M6W3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clhc1Q5M6W3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clhc1Q5M6W3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.59■□□□□ 0.89
Clhc1Q5M6W3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Clhc1Q5M6W3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clhc1Q5M6W3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Clhc1Q5M6W3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clhc1Q5M6W3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clhc1Q5M6W3 Gm6311-201ENSMUST00000073790 878 ntBASIC20.58■□□□□ 0.89
Clhc1Q5M6W3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms