Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tmem40Q4FJU9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem40Q4FJU9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem40Q4FJU9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.34■□□□□ 0.53
Tmem40Q4FJU9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tmem40Q4FJU9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tmem40Q4FJU9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem40Q4FJU9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem40Q4FJU9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Tmem40Q4FJU9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem40Q4FJU9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem40Q4FJU9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem40Q4FJU9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem40Q4FJU9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem40Q4FJU9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tmem40Q4FJU9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem40Q4FJU9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tmem40Q4FJU9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem40Q4FJU9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.27■□□□□ 0.52
Tmem40Q4FJU9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem40Q4FJU9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Tmem40Q4FJU9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmem40Q4FJU9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmem40Q4FJU9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem40Q4FJU9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem40Q4FJU9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 273.7 ms