Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx3-2P97503 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx3-2P97503 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nkx3-2P97503 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx3-2P97503 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nkx3-2P97503 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx3-2P97503 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx3-2P97503 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nkx3-2P97503 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.29■□□□□ 0.84
Nkx3-2P97503 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx3-2P97503 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nkx3-2P97503 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx3-2P97503 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx3-2P97503 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nkx3-2P97503 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nkx3-2P97503 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx3-2P97503 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.28■□□□□ 0.84
Nkx3-2P97503 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.28■□□□□ 0.84
Nkx3-2P97503 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nkx3-2P97503 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx3-2P97503 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx3-2P97503 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.27■□□□□ 0.84
Nkx3-2P97503 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx3-2P97503 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx3-2P97503 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nkx3-2P97503 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.25■□□□□ 0.83
Nkx3-2P97503 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx3-2P97503 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx3-2P97503 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.25■□□□□ 0.83
Nkx3-2P97503 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.25■□□□□ 0.83
Nkx3-2P97503 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx3-2P97503 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx3-2P97503 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx3-2P97503 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx3-2P97503 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx3-2P97503 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx3-2P97503 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Gm15820-201ENSMUST00000201566 728 ntBASIC20.22■□□□□ 0.83
Nkx3-2P97503 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx3-2P97503 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.21■□□□□ 0.83
Nkx3-2P97503 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx3-2P97503 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Gm22567-201ENSMUST00000175542 342 ntBASIC20.2■□□□□ 0.82
Nkx3-2P97503 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx3-2P97503 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms