Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccr8P56484 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccr8P56484 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccr8P56484 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccr8P56484 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccr8P56484 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccr8P56484 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccr8P56484 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccr8P56484 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccr8P56484 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccr8P56484 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Ccr8P56484 Gm10420-201ENSMUST00000121713 882 ntBASIC18.51■□□□□ 0.55
Ccr8P56484 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccr8P56484 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccr8P56484 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.5■□□□□ 0.55
Ccr8P56484 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.5■□□□□ 0.55
Ccr8P56484 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccr8P56484 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ccr8P56484 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccr8P56484 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccr8P56484 Cap2-205ENSMUST00000225824 1634 ntBASIC18.49■□□□□ 0.55
Ccr8P56484 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ccr8P56484 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccr8P56484 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.47■□□□□ 0.55
Ccr8P56484 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccr8P56484 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccr8P56484 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccr8P56484 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccr8P56484 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccr8P56484 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccr8P56484 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccr8P56484 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccr8P56484 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Ccr8P56484 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccr8P56484 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccr8P56484 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccr8P56484 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.45■□□□□ 0.54
Ccr8P56484 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccr8P56484 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccr8P56484 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccr8P56484 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccr8P56484 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ccr8P56484 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ccr8P56484 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccr8P56484 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.43■□□□□ 0.54
Ccr8P56484 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccr8P56484 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccr8P56484 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccr8P56484 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccr8P56484 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccr8P56484 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccr8P56484 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccr8P56484 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccr8P56484 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms