Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.63■□□□□ 0.89
CcnfP51944 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.63■□□□□ 0.89
CcnfP51944 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CcnfP51944 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CcnfP51944 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CcnfP51944 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CcnfP51944 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CcnfP51944 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CcnfP51944 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CcnfP51944 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CcnfP51944 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CcnfP51944 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CcnfP51944 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CcnfP51944 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CcnfP51944 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.61■□□□□ 0.89
CcnfP51944 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CcnfP51944 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CcnfP51944 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.61■□□□□ 0.89
CcnfP51944 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CcnfP51944 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
CcnfP51944 Terc-201ENSMUST00000082862 423 ntBASIC20.6■□□□□ 0.89
CcnfP51944 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CcnfP51944 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CcnfP51944 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.59■□□□□ 0.89
CcnfP51944 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CcnfP51944 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CcnfP51944 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CcnfP51944 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CcnfP51944 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.58■□□□□ 0.89
CcnfP51944 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CcnfP51944 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CcnfP51944 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CcnfP51944 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CcnfP51944 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CcnfP51944 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CcnfP51944 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CcnfP51944 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CcnfP51944 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CcnfP51944 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CcnfP51944 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CcnfP51944 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CcnfP51944 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
CcnfP51944 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CcnfP51944 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.56■□□□□ 0.88
CcnfP51944 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CcnfP51944 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CcnfP51944 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CcnfP51944 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CcnfP51944 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.55■□□□□ 0.88
CcnfP51944 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CcnfP51944 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CcnfP51944 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Mir3960-201ENSMUST00000198213 73 ntBASIC20.54■□□□□ 0.88
CcnfP51944 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CcnfP51944 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CcnfP51944 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CcnfP51944 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CcnfP51944 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CcnfP51944 Gm6821-201ENSMUST00000107540 542 ntBASIC20.53■□□□□ 0.88
CcnfP51944 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.53■□□□□ 0.88
CcnfP51944 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CcnfP51944 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CcnfP51944 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CcnfP51944 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.52■□□□□ 0.88
CcnfP51944 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CcnfP51944 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CcnfP51944 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CcnfP51944 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CcnfP51944 Gm45364-201ENSMUST00000210883 159 ntBASIC20.51■□□□□ 0.87
CcnfP51944 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CcnfP51944 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CcnfP51944 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CcnfP51944 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CcnfP51944 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CcnfP51944 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CcnfP51944 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.5■□□□□ 0.87
CcnfP51944 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CcnfP51944 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CcnfP51944 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CcnfP51944 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.49■□□□□ 0.87
CcnfP51944 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CcnfP51944 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CcnfP51944 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CcnfP51944 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CcnfP51944 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CcnfP51944 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CcnfP51944 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms