Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp9P49962 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp9P49962 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srp9P49962 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Srp9P49962 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp9P49962 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srp9P49962 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srp9P49962 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Srp9P49962 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.21■□□□□ 0.51
Srp9P49962 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srp9P49962 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Srp9P49962 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.21■□□□□ 0.51
Srp9P49962 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srp9P49962 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srp9P49962 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp9P49962 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp9P49962 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp9P49962 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srp9P49962 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Srp9P49962 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.2■□□□□ 0.5
Srp9P49962 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Srp9P49962 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Srp9P49962 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp9P49962 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp9P49962 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.19■□□□□ 0.5
Srp9P49962 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.19■□□□□ 0.5
Srp9P49962 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srp9P49962 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srp9P49962 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srp9P49962 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.18■□□□□ 0.5
Srp9P49962 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp9P49962 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Srp9P49962 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp9P49962 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Srp9P49962 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Srp9P49962 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.18■□□□□ 0.5
Srp9P49962 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.18■□□□□ 0.5
Srp9P49962 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Srp9P49962 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srp9P49962 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp9P49962 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp9P49962 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srp9P49962 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp9P49962 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srp9P49962 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp9P49962 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp9P49962 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Srp9P49962 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp9P49962 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Srp9P49962 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp9P49962 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srp9P49962 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Srp9P49962 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp9P49962 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp9P49962 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp9P49962 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Srp9P49962 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp9P49962 Notumos-201ENSMUST00000151998 2659 ntBASIC18.14■□□□□ 0.49
Srp9P49962 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.14■□□□□ 0.49
Srp9P49962 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp9P49962 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Srp9P49962 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp9P49962 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp9P49962 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp9P49962 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Srp9P49962 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.13■□□□□ 0.49
Srp9P49962 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp9P49962 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.12■□□□□ 0.49
Srp9P49962 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.12■□□□□ 0.49
Srp9P49962 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.12■□□□□ 0.49
Srp9P49962 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Srp9P49962 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp9P49962 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Srp9P49962 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Srp9P49962 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
Srp9P49962 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Srp9P49962 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.11■□□□□ 0.49
Srp9P49962 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.11■□□□□ 0.49
Srp9P49962 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Srp9P49962 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Srp9P49962 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Srp9P49962 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms