Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Etf1-202ENSMUST00000180351 108 ntBASIC20.46■□□□□ 0.87
Nkx2-6P43688 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.45■□□□□ 0.86
Nkx2-6P43688 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.45■□□□□ 0.86
Nkx2-6P43688 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-6P43688 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Nkx2-6P43688 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-6P43688 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx2-6P43688 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-6P43688 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.43■□□□□ 0.86
Nkx2-6P43688 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nkx2-6P43688 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-6P43688 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.42■□□□□ 0.86
Nkx2-6P43688 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-6P43688 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.41■□□□□ 0.86
Nkx2-6P43688 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nkx2-6P43688 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.4■□□□□ 0.86
Nkx2-6P43688 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-6P43688 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-6P43688 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-6P43688 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-6P43688 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nkx2-6P43688 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-6P43688 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.38■□□□□ 0.85
Nkx2-6P43688 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.38■□□□□ 0.85
Nkx2-6P43688 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-6P43688 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-6P43688 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
Nkx2-6P43688 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkx2-6P43688 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.37■□□□□ 0.85
Nkx2-6P43688 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-6P43688 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkx2-6P43688 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.36■□□□□ 0.85
Nkx2-6P43688 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.36■□□□□ 0.85
Nkx2-6P43688 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-6P43688 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.35■□□□□ 0.85
Nkx2-6P43688 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-6P43688 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.34■□□□□ 0.85
Nkx2-6P43688 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Gm7417-201ENSMUST00000192950 473 ntBASIC20.34■□□□□ 0.85
Nkx2-6P43688 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-6P43688 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Nkx2-6P43688 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-6P43688 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms