Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmx3P42581 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmx3P42581 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.8■□□□□ 0.44
Hmx3P42581 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hmx3P42581 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmx3P42581 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hmx3P42581 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmx3P42581 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hmx3P42581 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmx3P42581 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmx3P42581 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hmx3P42581 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmx3P42581 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmx3P42581 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.78■□□□□ 0.44
Hmx3P42581 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmx3P42581 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmx3P42581 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmx3P42581 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmx3P42581 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmx3P42581 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmx3P42581 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmx3P42581 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmx3P42581 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmx3P42581 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmx3P42581 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmx3P42581 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.75■□□□□ 0.43
Hmx3P42581 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.75■□□□□ 0.43
Hmx3P42581 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmx3P42581 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmx3P42581 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Hmx3P42581 Gm7432-201ENSMUST00000210343 879 ntBASIC17.74■□□□□ 0.43
Hmx3P42581 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hmx3P42581 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmx3P42581 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmx3P42581 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.73■□□□□ 0.43
Hmx3P42581 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmx3P42581 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.73■□□□□ 0.43
Hmx3P42581 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmx3P42581 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmx3P42581 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmx3P42581 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmx3P42581 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmx3P42581 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmx3P42581 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmx3P42581 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmx3P42581 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.72■□□□□ 0.43
Hmx3P42581 Gm4799-201ENSMUST00000095396 657 ntBASIC17.72■□□□□ 0.43
Hmx3P42581 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmx3P42581 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Hmx3P42581 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hmx3P42581 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hmx3P42581 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmx3P42581 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hmx3P42581 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hmx3P42581 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmx3P42581 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Hmx3P42581 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmx3P42581 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms