Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.14■□□□□ 0.81
Sox6P40645 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox6P40645 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.14■□□□□ 0.81
Sox6P40645 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox6P40645 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox6P40645 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox6P40645 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox6P40645 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox6P40645 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox6P40645 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sox6P40645 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox6P40645 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sox6P40645 Gm11175-201ENSMUST00000116172 543 ntBASIC20.12■□□□□ 0.81
Sox6P40645 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sox6P40645 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox6P40645 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox6P40645 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox6P40645 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sox6P40645 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox6P40645 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox6P40645 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox6P40645 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox6P40645 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.11■□□□□ 0.81
Sox6P40645 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox6P40645 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox6P40645 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.1■□□□□ 0.81
Sox6P40645 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox6P40645 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox6P40645 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox6P40645 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sox6P40645 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sox6P40645 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sox6P40645 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.09■□□□□ 0.81
Sox6P40645 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox6P40645 Mir6538-201ENSMUST00000183713 110 ntBASIC20.09■□□□□ 0.81
Sox6P40645 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sox6P40645 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Sox6P40645 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox6P40645 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox6P40645 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox6P40645 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox6P40645 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Sox6P40645 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Sox6P40645 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox6P40645 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox6P40645 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox6P40645 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Sox6P40645 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox6P40645 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Sox6P40645 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox6P40645 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox6P40645 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sox6P40645 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sox6P40645 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox6P40645 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Sox6P40645 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox6P40645 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox6P40645 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox6P40645 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox6P40645 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sox6P40645 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sox6P40645 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Sox6P40645 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.05■□□□□ 0.8
Sox6P40645 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox6P40645 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.04■□□□□ 0.8
Sox6P40645 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox6P40645 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sox6P40645 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox6P40645 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox6P40645 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.03■□□□□ 0.8
Sox6P40645 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox6P40645 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Sox6P40645 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sox6P40645 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox6P40645 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox6P40645 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox6P40645 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox6P40645 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Sox6P40645 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox6P40645 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox6P40645 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.01■□□□□ 0.79
Sox6P40645 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.01■□□□□ 0.79
Sox6P40645 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sox6P40645 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.01■□□□□ 0.79
Sox6P40645 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.01■□□□□ 0.79
Sox6P40645 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox6P40645 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox6P40645 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox6P40645 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sox6P40645 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox6P40645 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Sox6P40645 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox6P40645 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20■□□□□ 0.79
Sox6P40645 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox6P40645 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms