Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RetP35546 Gm13238-201ENSMUST00000117655 780 ntBASIC20.16■□□□□ 0.82
RetP35546 Gm45102-201ENSMUST00000207427 857 ntBASIC20.16■□□□□ 0.82
RetP35546 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.16■□□□□ 0.82
RetP35546 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RetP35546 Gm45444-201ENSMUST00000211394 898 ntBASIC20.15■□□□□ 0.82
RetP35546 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.15■□□□□ 0.82
RetP35546 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.15■□□□□ 0.82
RetP35546 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RetP35546 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RetP35546 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RetP35546 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RetP35546 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RetP35546 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
RetP35546 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RetP35546 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RetP35546 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RetP35546 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RetP35546 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RetP35546 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RetP35546 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RetP35546 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RetP35546 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RetP35546 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RetP35546 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RetP35546 Gm14117-201ENSMUST00000122417 843 ntBASIC20.12■□□□□ 0.81
RetP35546 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RetP35546 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.12■□□□□ 0.81
RetP35546 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RetP35546 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RetP35546 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.11■□□□□ 0.81
RetP35546 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RetP35546 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RetP35546 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RetP35546 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RetP35546 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.11■□□□□ 0.81
RetP35546 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RetP35546 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.1■□□□□ 0.81
RetP35546 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RetP35546 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RetP35546 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.1■□□□□ 0.81
RetP35546 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RetP35546 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RetP35546 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.09■□□□□ 0.81
RetP35546 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.09■□□□□ 0.81
RetP35546 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RetP35546 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RetP35546 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RetP35546 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RetP35546 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RetP35546 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RetP35546 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RetP35546 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RetP35546 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RetP35546 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RetP35546 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.07■□□□□ 0.8
RetP35546 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RetP35546 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RetP35546 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RetP35546 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.06■□□□□ 0.8
RetP35546 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.06■□□□□ 0.8
RetP35546 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RetP35546 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RetP35546 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RetP35546 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RetP35546 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RetP35546 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RetP35546 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
RetP35546 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.04■□□□□ 0.8
RetP35546 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RetP35546 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RetP35546 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RetP35546 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms