Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.97■□□□□ 0.79
Thbs1P35441 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thbs1P35441 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Thbs1P35441 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Thbs1P35441 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Thbs1P35441 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thbs1P35441 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Thbs1P35441 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Thbs1P35441 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.96■□□□□ 0.79
Thbs1P35441 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.96■□□□□ 0.79
Thbs1P35441 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Thbs1P35441 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Thbs1P35441 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thbs1P35441 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thbs1P35441 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Thbs1P35441 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Thbs1P35441 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thbs1P35441 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thbs1P35441 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thbs1P35441 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Thbs1P35441 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Thbs1P35441 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs1P35441 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs1P35441 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs1P35441 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.94■□□□□ 0.78
Thbs1P35441 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs1P35441 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs1P35441 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.93■□□□□ 0.78
Thbs1P35441 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.93■□□□□ 0.78
Thbs1P35441 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Thbs1P35441 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Thbs1P35441 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Thbs1P35441 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs1P35441 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Thbs1P35441 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.91■□□□□ 0.78
Thbs1P35441 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.91■□□□□ 0.78
Thbs1P35441 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs1P35441 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Thbs1P35441 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Thbs1P35441 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs1P35441 Gm14523-201ENSMUST00000117260 558 ntBASIC19.89■□□□□ 0.77
Thbs1P35441 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs1P35441 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs1P35441 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs1P35441 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs1P35441 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs1P35441 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs1P35441 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.88■□□□□ 0.77
Thbs1P35441 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs1P35441 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Thbs1P35441 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs1P35441 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Gm27502-201ENSMUST00000183495 199 ntBASIC19.87■□□□□ 0.77
Thbs1P35441 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thbs1P35441 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Thbs1P35441 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs1P35441 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs1P35441 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Thbs1P35441 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Thbs1P35441 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs1P35441 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Thbs1P35441 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.86■□□□□ 0.77
Thbs1P35441 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.86■□□□□ 0.77
Thbs1P35441 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
Thbs1P35441 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 796.7 ms