Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slc6a1P31648 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a1P31648 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a1P31648 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a1P31648 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a1P31648 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a1P31648 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a1P31648 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a1P31648 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc6a1P31648 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a1P31648 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a1P31648 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Slc6a1P31648 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a1P31648 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a1P31648 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc6a1P31648 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a1P31648 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.47■□□□□ 0.55
Slc6a1P31648 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slc6a1P31648 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a1P31648 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.47■□□□□ 0.55
Slc6a1P31648 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.46■□□□□ 0.55
Slc6a1P31648 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a1P31648 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Slc6a1P31648 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a1P31648 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a1P31648 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a1P31648 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slc6a1P31648 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Slc6a1P31648 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Slc6a1P31648 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Slc6a1P31648 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.44■□□□□ 0.54
Slc6a1P31648 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a1P31648 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a1P31648 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a1P31648 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.43■□□□□ 0.54
Slc6a1P31648 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a1P31648 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a1P31648 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
Slc6a1P31648 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc6a1P31648 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a1P31648 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a1P31648 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc6a1P31648 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a1P31648 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a1P31648 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.41■□□□□ 0.54
Slc6a1P31648 Iqck-206ENSMUST00000208658 2891 ntBASIC18.41■□□□□ 0.54
Slc6a1P31648 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc6a1P31648 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a1P31648 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a1P31648 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a1P31648 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a1P31648 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a1P31648 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a1P31648 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Slc6a1P31648 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a1P31648 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a1P31648 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a1P31648 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a1P31648 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a1P31648 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a1P31648 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a1P31648 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a1P31648 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a1P31648 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Slc6a1P31648 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a1P31648 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.39■□□□□ 0.53
Slc6a1P31648 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a1P31648 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc6a1P31648 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a1P31648 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a1P31648 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms