Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.71■□□□□ 0.75
Cd40lgP27548 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cd40lgP27548 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd40lgP27548 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd40lgP27548 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd40lgP27548 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd40lgP27548 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.7■□□□□ 0.74
Cd40lgP27548 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd40lgP27548 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd40lgP27548 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cd40lgP27548 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cd40lgP27548 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.69■□□□□ 0.74
Cd40lgP27548 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cd40lgP27548 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd40lgP27548 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd40lgP27548 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cd40lgP27548 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd40lgP27548 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd40lgP27548 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cd40lgP27548 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cd40lgP27548 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.67■□□□□ 0.74
Cd40lgP27548 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cd40lgP27548 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cd40lgP27548 Gm5921-201ENSMUST00000075898 882 ntBASIC19.66■□□□□ 0.74
Cd40lgP27548 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cd40lgP27548 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Cd40lgP27548 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd40lgP27548 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.65■□□□□ 0.74
Cd40lgP27548 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cd40lgP27548 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd40lgP27548 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cd40lgP27548 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd40lgP27548 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.64■□□□□ 0.73
Cd40lgP27548 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.64■□□□□ 0.73
Cd40lgP27548 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.64■□□□□ 0.73
Cd40lgP27548 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd40lgP27548 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cd40lgP27548 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.63■□□□□ 0.73
Cd40lgP27548 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd40lgP27548 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40lgP27548 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40lgP27548 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40lgP27548 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40lgP27548 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.62■□□□□ 0.73
Cd40lgP27548 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd40lgP27548 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cd40lgP27548 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40lgP27548 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cd40lgP27548 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Cd40lgP27548 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40lgP27548 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40lgP27548 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40lgP27548 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd40lgP27548 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.61■□□□□ 0.73
Cd40lgP27548 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40lgP27548 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd40lgP27548 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cd40lgP27548 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd40lgP27548 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms