Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.22■□□□□ 0.35
Fn1P11276 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fn1P11276 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.21■□□□□ 0.35
Fn1P11276 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fn1P11276 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
Fn1P11276 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fn1P11276 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fn1P11276 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.21■□□□□ 0.34
Fn1P11276 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.21■□□□□ 0.34
Fn1P11276 Gm26571-201ENSMUST00000181399 666 ntBASIC17.21■□□□□ 0.34
Fn1P11276 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fn1P11276 Gm10849-201ENSMUST00000100397 618 ntBASIC17.2■□□□□ 0.34
Fn1P11276 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fn1P11276 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.2■□□□□ 0.34
Fn1P11276 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Fn1P11276 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fn1P11276 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fn1P11276 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Fn1P11276 Gm27405-201ENSMUST00000184201 112 ntBASIC17.2■□□□□ 0.34
Fn1P11276 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fn1P11276 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fn1P11276 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Fn1P11276 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fn1P11276 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Fn1P11276 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.18■□□□□ 0.34
Fn1P11276 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fn1P11276 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fn1P11276 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.17■□□□□ 0.34
Fn1P11276 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fn1P11276 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Fn1P11276 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fn1P11276 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fn1P11276 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fn1P11276 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.16■□□□□ 0.34
Fn1P11276 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Fn1P11276 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fn1P11276 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fn1P11276 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fn1P11276 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Fn1P11276 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Fn1P11276 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fn1P11276 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Fn1P11276 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fn1P11276 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fn1P11276 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.14■□□□□ 0.33
Fn1P11276 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fn1P11276 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fn1P11276 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.13■□□□□ 0.33
Fn1P11276 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fn1P11276 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.13■□□□□ 0.33
Fn1P11276 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fn1P11276 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fn1P11276 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
Fn1P11276 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.12■□□□□ 0.33
Fn1P11276 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fn1P11276 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fn1P11276 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fn1P11276 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.12■□□□□ 0.33
Fn1P11276 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fn1P11276 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fn1P11276 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fn1P11276 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fn1P11276 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fn1P11276 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fn1P11276 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.1■□□□□ 0.33
Fn1P11276 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fn1P11276 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.1■□□□□ 0.33
Fn1P11276 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fn1P11276 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Fn1P11276 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fn1P11276 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fn1P11276 Gm43017-201ENSMUST00000198296 752 ntBASIC17.09■□□□□ 0.33
Fn1P11276 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fn1P11276 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fn1P11276 Gm37179-201ENSMUST00000194862 823 ntBASIC17.08■□□□□ 0.33
Fn1P11276 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Fn1P11276 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Fn1P11276 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fn1P11276 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Fn1P11276 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fn1P11276 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fn1P11276 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Fn1P11276 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fn1P11276 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fn1P11276 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fn1P11276 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.07■□□□□ 0.32
Fn1P11276 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms