Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm5812-201ENSMUST00000061073 957 ntBASIC19.92■□□□□ 0.78
BckdkO55028 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BckdkO55028 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.92■□□□□ 0.78
BckdkO55028 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BckdkO55028 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BckdkO55028 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BckdkO55028 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BckdkO55028 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BckdkO55028 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BckdkO55028 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BckdkO55028 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.9■□□□□ 0.78
BckdkO55028 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BckdkO55028 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
BckdkO55028 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BckdkO55028 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BckdkO55028 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.9■□□□□ 0.78
BckdkO55028 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
BckdkO55028 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BckdkO55028 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BckdkO55028 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BckdkO55028 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BckdkO55028 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BckdkO55028 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BckdkO55028 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BckdkO55028 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.88■□□□□ 0.77
BckdkO55028 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
BckdkO55028 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BckdkO55028 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BckdkO55028 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BckdkO55028 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BckdkO55028 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BckdkO55028 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BckdkO55028 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.87■□□□□ 0.77
BckdkO55028 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
BckdkO55028 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BckdkO55028 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.86■□□□□ 0.77
BckdkO55028 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BckdkO55028 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BckdkO55028 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BckdkO55028 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BckdkO55028 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BckdkO55028 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
BckdkO55028 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
BckdkO55028 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BckdkO55028 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BckdkO55028 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BckdkO55028 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.83■□□□□ 0.77
BckdkO55028 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BckdkO55028 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.83■□□□□ 0.77
BckdkO55028 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BckdkO55028 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BckdkO55028 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
BckdkO55028 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
BckdkO55028 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.83■□□□□ 0.76
BckdkO55028 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
BckdkO55028 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BckdkO55028 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.82■□□□□ 0.76
BckdkO55028 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.82■□□□□ 0.76
BckdkO55028 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.82■□□□□ 0.76
BckdkO55028 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BckdkO55028 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BckdkO55028 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.81■□□□□ 0.76
BckdkO55028 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BckdkO55028 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BckdkO55028 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.81■□□□□ 0.76
BckdkO55028 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BckdkO55028 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BckdkO55028 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.81■□□□□ 0.76
BckdkO55028 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.8■□□□□ 0.76
BckdkO55028 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.8■□□□□ 0.76
BckdkO55028 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BckdkO55028 Gm15546-201ENSMUST00000122095 826 ntBASIC19.8■□□□□ 0.76
BckdkO55028 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.8■□□□□ 0.76
BckdkO55028 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BckdkO55028 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BckdkO55028 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BckdkO55028 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.79■□□□□ 0.76
BckdkO55028 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BckdkO55028 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.79■□□□□ 0.76
BckdkO55028 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.79■□□□□ 0.76
BckdkO55028 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BckdkO55028 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms