Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.53■□□□□ 0.72
Rnf13O54965 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.53■□□□□ 0.72
Rnf13O54965 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf13O54965 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rnf13O54965 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf13O54965 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Rnf13O54965 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf13O54965 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rnf13O54965 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf13O54965 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf13O54965 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.52■□□□□ 0.71
Rnf13O54965 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.52■□□□□ 0.71
Rnf13O54965 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf13O54965 Gm11599-201ENSMUST00000118720 878 ntBASIC19.51■□□□□ 0.71
Rnf13O54965 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf13O54965 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf13O54965 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf13O54965 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf13O54965 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf13O54965 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf13O54965 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf13O54965 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf13O54965 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf13O54965 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf13O54965 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf13O54965 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rnf13O54965 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf13O54965 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf13O54965 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf13O54965 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf13O54965 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf13O54965 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
Rnf13O54965 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Rnf13O54965 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.46■□□□□ 0.71
Rnf13O54965 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Rnf13O54965 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf13O54965 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf13O54965 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf13O54965 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf13O54965 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf13O54965 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf13O54965 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf13O54965 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf13O54965 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf13O54965 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf13O54965 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf13O54965 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf13O54965 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf13O54965 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf13O54965 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf13O54965 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.43■□□□□ 0.7
Rnf13O54965 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf13O54965 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf13O54965 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf13O54965 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.42■□□□□ 0.7
Rnf13O54965 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf13O54965 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf13O54965 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf13O54965 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf13O54965 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf13O54965 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.41■□□□□ 0.7
Rnf13O54965 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rnf13O54965 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf13O54965 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf13O54965 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf13O54965 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms