Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6bO35451 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6bO35451 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6bO35451 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6bO35451 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6bO35451 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.59■□□□□ 0.57
Atf6bO35451 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Atf6bO35451 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6bO35451 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6bO35451 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6bO35451 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Atf6bO35451 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6bO35451 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6bO35451 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6bO35451 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atf6bO35451 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Atf6bO35451 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6bO35451 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6bO35451 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6bO35451 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6bO35451 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6bO35451 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6bO35451 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6bO35451 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6bO35451 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.55■□□□□ 0.56
Atf6bO35451 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.55■□□□□ 0.56
Atf6bO35451 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.55■□□□□ 0.56
Atf6bO35451 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.55■□□□□ 0.56
Atf6bO35451 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.55■□□□□ 0.56
Atf6bO35451 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.55■□□□□ 0.56
Atf6bO35451 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.55■□□□□ 0.56
Atf6bO35451 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6bO35451 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.54■□□□□ 0.56
Atf6bO35451 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6bO35451 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atf6bO35451 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atf6bO35451 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Atf6bO35451 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6bO35451 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.53■□□□□ 0.56
Atf6bO35451 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6bO35451 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Atf6bO35451 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Atf6bO35451 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6bO35451 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atf6bO35451 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atf6bO35451 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Atf6bO35451 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.51■□□□□ 0.55
Atf6bO35451 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6bO35451 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Atf6bO35451 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6bO35451 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.5■□□□□ 0.55
Atf6bO35451 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Atf6bO35451 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.5■□□□□ 0.55
Atf6bO35451 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6bO35451 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6bO35451 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6bO35451 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf6bO35451 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atf6bO35451 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms