Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.15□□□□□ -0.14
Pkd1O08852 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1O08852 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.15□□□□□ -0.14
Pkd1O08852 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.14□□□□□ -0.15
Pkd1O08852 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.14□□□□□ -0.15
Pkd1O08852 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.14□□□□□ -0.15
Pkd1O08852 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1O08852 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pkd1O08852 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1O08852 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
Pkd1O08852 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pkd1O08852 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.13□□□□□ -0.15
Pkd1O08852 Gm10399-202ENSMUST00000202768 748 ntBASIC14.13□□□□□ -0.15
Pkd1O08852 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.13□□□□□ -0.15
Pkd1O08852 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Pkd1O08852 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC14.12□□□□□ -0.15
Pkd1O08852 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pkd1O08852 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Gm6139-201ENSMUST00000079261 882 ntBASIC14.11□□□□□ -0.15
Pkd1O08852 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pkd1O08852 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.1□□□□□ -0.15
Pkd1O08852 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.1□□□□□ -0.15
Pkd1O08852 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pkd1O08852 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pkd1O08852 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Pkd1O08852 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pkd1O08852 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.09□□□□□ -0.15
Pkd1O08852 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC14.08□□□□□ -0.15
Pkd1O08852 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pkd1O08852 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.08□□□□□ -0.15
Pkd1O08852 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Pkd1O08852 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pkd1O08852 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pkd1O08852 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Pkd1O08852 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pkd1O08852 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.08□□□□□ -0.16
Pkd1O08852 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.07□□□□□ -0.16
Pkd1O08852 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pkd1O08852 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pkd1O08852 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.07□□□□□ -0.16
Pkd1O08852 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pkd1O08852 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pkd1O08852 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pkd1O08852 Gm27011-201ENSMUST00000182352 972 ntBASIC14.06□□□□□ -0.16
Pkd1O08852 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.06□□□□□ -0.16
Pkd1O08852 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pkd1O08852 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pkd1O08852 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pkd1O08852 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pkd1O08852 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pkd1O08852 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.05□□□□□ -0.16
Pkd1O08852 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pkd1O08852 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pkd1O08852 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms