Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.81□□□□□ -0.36
Herc1E9PZP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.81□□□□□ -0.36
Herc1E9PZP8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Herc1E9PZP8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc1E9PZP8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Herc1E9PZP8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.81□□□□□ -0.36
Herc1E9PZP8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.8□□□□□ -0.36
Herc1E9PZP8 Nespas-201ENSMUST00000143738 1083 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Gm43445-201ENSMUST00000198564 2091 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Herc1E9PZP8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Gm42642-201ENSMUST00000200683 355 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Herc1E9PZP8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Herc1E9PZP8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm10493-201ENSMUST00000097270 612 ntBASIC12.72□□□□□ -0.37
Herc1E9PZP8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Herc1E9PZP8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc1E9PZP8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc1E9PZP8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.71□□□□□ -0.38
Herc1E9PZP8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Herc1E9PZP8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC12.69□□□□□ -0.38
Herc1E9PZP8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms