Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.81□□□□□ -0.36
Herc1E9PZP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.81□□□□□ -0.36
Herc1E9PZP8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Herc1E9PZP8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Herc1E9PZP8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Herc1E9PZP8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.81□□□□□ -0.36
Herc1E9PZP8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Herc1E9PZP8 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.8□□□□□ -0.36
Herc1E9PZP8 Nespas-201ENSMUST00000143738 1083 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Gm43445-201ENSMUST00000198564 2091 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Herc1E9PZP8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Gm42642-201ENSMUST00000200683 355 ntBASIC12.79□□□□□ -0.36
Herc1E9PZP8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Herc1E9PZP8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc1E9PZP8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Herc1E9PZP8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Herc1E9PZP8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc1E9PZP8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc1E9PZP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.75□□□□□ -0.37
Herc1E9PZP8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Herc1E9PZP8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc1E9PZP8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc1E9PZP8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm10493-201ENSMUST00000097270 612 ntBASIC12.72□□□□□ -0.37
Herc1E9PZP8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc1E9PZP8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Herc1E9PZP8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc1E9PZP8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc1E9PZP8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.71□□□□□ -0.38
Herc1E9PZP8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Herc1E9PZP8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.7□□□□□ -0.38
Herc1E9PZP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc1E9PZP8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC12.69□□□□□ -0.38
Herc1E9PZP8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Herc1E9PZP8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms