Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a5A6H584 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Col6a5A6H584 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a5A6H584 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a5A6H584 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col6a5A6H584 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a5A6H584 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col6a5A6H584 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a5A6H584 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a5A6H584 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.89■□□□□ 0.29
Col6a5A6H584 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a5A6H584 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a5A6H584 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col6a5A6H584 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col6a5A6H584 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a5A6H584 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a5A6H584 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a5A6H584 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.88■□□□□ 0.29
Col6a5A6H584 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a5A6H584 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a5A6H584 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.87■□□□□ 0.29
Col6a5A6H584 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a5A6H584 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a5A6H584 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a5A6H584 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a5A6H584 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.86■□□□□ 0.29
Col6a5A6H584 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a5A6H584 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.86■□□□□ 0.29
Col6a5A6H584 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.86■□□□□ 0.29
Col6a5A6H584 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.86■□□□□ 0.29
Col6a5A6H584 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a5A6H584 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col6a5A6H584 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a5A6H584 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a5A6H584 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a5A6H584 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.85■□□□□ 0.29
Col6a5A6H584 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a5A6H584 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a5A6H584 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.84■□□□□ 0.29
Col6a5A6H584 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
Col6a5A6H584 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col6a5A6H584 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a5A6H584 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col6a5A6H584 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a5A6H584 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Col6a5A6H584 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a5A6H584 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a5A6H584 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a5A6H584 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a5A6H584 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a5A6H584 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.83■□□□□ 0.28
Col6a5A6H584 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.83■□□□□ 0.28
Col6a5A6H584 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.83■□□□□ 0.28
Col6a5A6H584 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.83■□□□□ 0.28
Col6a5A6H584 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.83■□□□□ 0.28
Col6a5A6H584 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a5A6H584 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.82■□□□□ 0.28
Col6a5A6H584 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a5A6H584 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.82■□□□□ 0.28
Col6a5A6H584 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a5A6H584 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col6a5A6H584 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a5A6H584 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a5A6H584 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a5A6H584 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a5A6H584 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a5A6H584 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a5A6H584 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a5A6H584 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a5A6H584 Gm37179-201ENSMUST00000194862 823 ntBASIC16.79■□□□□ 0.28
Col6a5A6H584 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a5A6H584 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a5A6H584 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col6a5A6H584 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a5A6H584 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a5A6H584 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Col6a5A6H584 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a5A6H584 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Col6a5A6H584 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a5A6H584 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a5A6H584 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col6a5A6H584 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Col6a5A6H584 Mir7075-201ENSMUST00000184187 82 ntBASIC16.76■□□□□ 0.27
Col6a5A6H584 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a5A6H584 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a5A6H584 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a5A6H584 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms