Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.54■□□□□ 0.72
CtcflA2APF3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CtcflA2APF3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CtcflA2APF3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CtcflA2APF3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CtcflA2APF3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CtcflA2APF3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CtcflA2APF3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CtcflA2APF3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.53■□□□□ 0.72
CtcflA2APF3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.53■□□□□ 0.72
CtcflA2APF3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CtcflA2APF3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CtcflA2APF3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.52■□□□□ 0.72
CtcflA2APF3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CtcflA2APF3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CtcflA2APF3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CtcflA2APF3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CtcflA2APF3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CtcflA2APF3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CtcflA2APF3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CtcflA2APF3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CtcflA2APF3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CtcflA2APF3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CtcflA2APF3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CtcflA2APF3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CtcflA2APF3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.5■□□□□ 0.71
CtcflA2APF3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CtcflA2APF3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CtcflA2APF3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CtcflA2APF3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CtcflA2APF3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.49■□□□□ 0.71
CtcflA2APF3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CtcflA2APF3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CtcflA2APF3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CtcflA2APF3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CtcflA2APF3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.48■□□□□ 0.71
CtcflA2APF3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CtcflA2APF3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtcflA2APF3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CtcflA2APF3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CtcflA2APF3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtcflA2APF3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CtcflA2APF3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtcflA2APF3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CtcflA2APF3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtcflA2APF3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtcflA2APF3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CtcflA2APF3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CtcflA2APF3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtcflA2APF3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CtcflA2APF3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.45■□□□□ 0.7
CtcflA2APF3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.45■□□□□ 0.7
CtcflA2APF3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtcflA2APF3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.45■□□□□ 0.7
CtcflA2APF3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtcflA2APF3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CtcflA2APF3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtcflA2APF3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.44■□□□□ 0.7
CtcflA2APF3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CtcflA2APF3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.44■□□□□ 0.7
CtcflA2APF3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtcflA2APF3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtcflA2APF3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtcflA2APF3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtcflA2APF3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CtcflA2APF3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CtcflA2APF3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CtcflA2APF3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtcflA2APF3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CtcflA2APF3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtcflA2APF3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.41■□□□□ 0.7
CtcflA2APF3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtcflA2APF3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtcflA2APF3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtcflA2APF3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtcflA2APF3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtcflA2APF3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.4■□□□□ 0.7
CtcflA2APF3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.4■□□□□ 0.7
CtcflA2APF3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.4■□□□□ 0.7
CtcflA2APF3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtcflA2APF3 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.4■□□□□ 0.7
CtcflA2APF3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.4■□□□□ 0.7
CtcflA2APF3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CtcflA2APF3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CtcflA2APF3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CtcflA2APF3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CtcflA2APF3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CtcflA2APF3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.39■□□□□ 0.69
CtcflA2APF3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms