Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc194A0A140LIT1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.43■■□□□ 1.02
Ccdc194A0A140LIT1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc194A0A140LIT1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc194A0A140LIT1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc194A0A140LIT1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 Gm11687-201ENSMUST00000118911 886 ntBASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ccdc194A0A140LIT1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.4■■□□□ 1.02
Ccdc194A0A140LIT1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.4■■□□□ 1.02
Ccdc194A0A140LIT1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc194A0A140LIT1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc194A0A140LIT1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc194A0A140LIT1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc194A0A140LIT1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc194A0A140LIT1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc194A0A140LIT1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc194A0A140LIT1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
Ccdc194A0A140LIT1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc194A0A140LIT1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.39■■□□□ 1.01
Ccdc194A0A140LIT1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc194A0A140LIT1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc194A0A140LIT1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc194A0A140LIT1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc194A0A140LIT1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc194A0A140LIT1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc194A0A140LIT1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc194A0A140LIT1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc194A0A140LIT1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ccdc194A0A140LIT1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc194A0A140LIT1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ccdc194A0A140LIT1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc194A0A140LIT1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc194A0A140LIT1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc194A0A140LIT1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms