Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7-5A0A0G2JFX6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav7-5A0A0G2JFX6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-5A0A0G2JFX6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-5A0A0G2JFX6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-5A0A0G2JFX6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav7-5A0A0G2JFX6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-5A0A0G2JFX6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav7-5A0A0G2JFX6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.86■□□□□ 0.29
Trav7-5A0A0G2JFX6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav7-5A0A0G2JFX6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-5A0A0G2JFX6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-5A0A0G2JFX6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-5A0A0G2JFX6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav7-5A0A0G2JFX6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav7-5A0A0G2JFX6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7-5A0A0G2JFX6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav7-5A0A0G2JFX6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7-5A0A0G2JFX6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms