Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav9-4A0A0B4J1K2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-4A0A0B4J1K2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9-4A0A0B4J1K2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Gm22567-201ENSMUST00000175542 342 ntBASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav9-4A0A0B4J1K2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-4A0A0B4J1K2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-4A0A0B4J1K2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav9-4A0A0B4J1K2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9-4A0A0B4J1K2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9-4A0A0B4J1K2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9-4A0A0B4J1K2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav9-4A0A0B4J1K2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav9-4A0A0B4J1K2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-4A0A0B4J1K2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9-4A0A0B4J1K2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9-4A0A0B4J1K2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav9-4A0A0B4J1K2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-4A0A0B4J1K2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9-4A0A0B4J1K2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9-4A0A0B4J1K2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav9-4A0A0B4J1K2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms