Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tcrg-V4A0A0B4J1J8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tcrg-V4A0A0B4J1J8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.08■□□□□ 0.17
Tcrg-V4A0A0B4J1J8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.08■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms