Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv3A0A0A6YYE2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv3A0A0A6YYE2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trbv3A0A0A6YYE2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv3A0A0A6YYE2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv3A0A0A6YYE2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv3A0A0A6YYE2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv3A0A0A6YYE2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv3A0A0A6YYE2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv3A0A0A6YYE2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv3A0A0A6YYE2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv3A0A0A6YYE2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv3A0A0A6YYE2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Trbv3A0A0A6YYE2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv3A0A0A6YYE2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv3A0A0A6YYE2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv3A0A0A6YYE2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.58■□□□□ 0.25
Trbv3A0A0A6YYE2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv3A0A0A6YYE2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv3A0A0A6YYE2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.56■□□□□ 0.24
Trbv3A0A0A6YYE2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv3A0A0A6YYE2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms