Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv23A0A0A6YWQ1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv23A0A0A6YWQ1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv23A0A0A6YWQ1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trbv23A0A0A6YWQ1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv23A0A0A6YWQ1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Trbv23A0A0A6YWQ1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv23A0A0A6YWQ1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv23A0A0A6YWQ1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv23A0A0A6YWQ1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv23A0A0A6YWQ1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv23A0A0A6YWQ1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.42■□□□□ 0.54
Trbv23A0A0A6YWQ1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Mir3960-201ENSMUST00000198213 73 ntBASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv23A0A0A6YWQ1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv23A0A0A6YWQ1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Trbv23A0A0A6YWQ1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv23A0A0A6YWQ1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv23A0A0A6YWQ1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv23A0A0A6YWQ1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbv23A0A0A6YWQ1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trbv23A0A0A6YWQ1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trbv23A0A0A6YWQ1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv23A0A0A6YWQ1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.38■□□□□ 0.53
Trbv23A0A0A6YWQ1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv23A0A0A6YWQ1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv23A0A0A6YWQ1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv23A0A0A6YWQ1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv23A0A0A6YWQ1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv23A0A0A6YWQ1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv23A0A0A6YWQ1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Gm6311-201ENSMUST00000073790 878 ntBASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms